HBV Target gene Detail Information

> NR1D2 Gene Search Result


Gene Information
Gene Name NR1D2
Gene ID 9975
Gene Full Name nuclear receptor subfamily 1 group D member 2
Gene Alias BD73|EAR-1R|REVERBB|REVERBbeta|RVR
Transcripts ENSG00000174738
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Nuclear receptors, Predicted intracellular proteins, Transcription factors
Uniport_ID Q14995
HGNC ID HGNC:7963
OMIM ID 602304
Summary This gene encodes a member of the nuclear hormone receptor family, specifically the NR1 subfamily of receptors. The encoded protein functions as a transcriptional repressor and may play a role in circadian rhythms and carbohydrate and lipid metabolism. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009]
Target gene [NR1D2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001710 chr3 221 209 90 520 View
1004444 chr3 78 2 1 81 View

Target gene [NR1D2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - NR1D2 peak across samples

Peak Plot

> Dataset: GSE68402 - NR1D2 peak across samples

Peak Plot

> Dataset: GSE270130 - NR1D2 peak across samples

Peak Plot

> Dataset: GSE131257 - NR1D2 peak across samples

Peak Plot