HTLV1 Target gene Detail Information

> NR6A1 Gene Search Result


Gene Information
Gene Name NR6A1
Gene ID 2649
Gene Full Name nuclear receptor subfamily 6 group A member 1
Gene Alias CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR
Transcripts ENSG00000148200
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Centrosome, Cytosol;
Membrane Info Nuclear receptors, Predicted intracellular proteins, Transcription factors
Uniport_ID Q15406
HGNC ID HGNC:7985
OMIM ID 602778
Summary This gene encodes an orphan nuclear receptor which is a member of the nuclear hormone receptor family. Its expression pattern suggests that it may be involved in neurogenesis and germ cell development. The protein can homodimerize and bind DNA, but in vivo targets have not been identified. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Jun 2013]
Target gene [NR6A1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6016217 chr9 11 1 0 12 View
6020484 chr9 7 0 0 7 View
6029035 chr9 0 1 0 1 View

Target gene [NR6A1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NR6A1 peak across samples

Peak Plot