HPV Target gene Detail Information

> NSD3 Gene Search Result


Gene Information
Gene Name NSD3
Gene ID 54904
Gene Full Name nuclear receptor binding SET domain protein 3
Gene Alias KMT3F|KMT3G|WHISTLE|WHSC1L1|pp14328
Transcripts ENSG00000147548
Virus HPV
Gene Type protein-coding
HPA Location Info Mitochondria;Nucleoplasm;
Membrane Info Cancer-related genes, Disease related genes, Enzymes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q9BZ95
HGNC ID HGNC:12767
OMIM ID 607083
Summary This gene is related to the Wolf-Hirschhorn syndrome candidate-1 gene and encodes a protein with PWWP (proline-tryptophan-tryptophan-proline) domains. This protein methylates histone H3 at lysine residues 4 and 27, which represses gene transcription. Two alternatively spliced variants have been described. [provided by RefSeq, May 2015]
Target gene [NSD3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5006275 chr8 13 1 0 14 View
5009136 chr8 19 0 0 19 View

Target gene [NSD3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE164690 scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE197461 scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - NSD3 peak across samples

Peak Plot

> Dataset: GSE143026 - NSD3 peak across samples

Peak Plot