HTLV1 Target gene Detail Information

> NTNG1 Gene Search Result


Gene Information
Gene Name NTNG1
Gene ID 22854
Gene Full Name netrin G1
Gene Alias Lmnt1|NetG1|NetrinG1
Transcripts ENSG00000162631
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;Intracellular and membrane;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9Y2I2
HGNC ID HGNC:23319
OMIM ID 608818
Summary This gene encodes a preproprotein that is processed into a secreted protein containing eukaroytic growth factor (EGF)-like domains. This protein acts to guide axon growth during neuronal development. Polymorphisms in this gene may be associated with schizophrenia. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Aug 2015]
Target gene [NTNG1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6017749 chr1 6 4 0 10 View
6019043 chr1 6 2 0 8 View
6021167 chr1 1 3 2 6 View
6021567 chr1 1 4 1 6 View

Target gene [NTNG1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NTNG1 peak across samples

Peak Plot