HTLV1 Target gene Detail Information

> PACSIN3 Gene Search Result


Gene Information
Gene Name PACSIN3
Gene ID 29763
Gene Full Name protein kinase C and casein kinase substrate in neurons 3
Gene Alias SDPIII
Transcripts ENSG00000165912
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Plasma membrane;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9UKS6
HGNC ID HGNC:8572
OMIM ID 606513
Summary This gene is a member of the protein kinase C and casein kinase substrate in neurons family. The encoded protein is involved in linking the actin cytoskeleton with vesicle formation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2010]
Target gene [PACSIN3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001341 chr11 338 115 19 472 View

Target gene [PACSIN3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PACSIN3 peak across samples

Peak Plot