HBV Target gene Detail Information

> PAFAH1B2 Gene Search Result


Gene Information
Gene Name PAFAH1B2
Gene ID 5049
Gene Full Name platelet activating factor acetylhydrolase 1b catalytic subunit 2
Gene Alias HEL-S-303
Transcripts ENSG00000168092
Virus HBV
Gene Type protein-coding
HPA Location Info Cytosol;Nucleoli, Plasma membrane;
Membrane Info Cancer-related genes, Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID P68402
HGNC ID HGNC:8575
OMIM ID 602508
Summary Platelet-activating factor acetylhydrolase (PAFAH) inactivates platelet-activating factor (PAF) into acetate and LYSO-PAF. This gene encodes the beta subunit of PAFAH, the other subunits are alpha and gamma. Multiple alternatively spliced transcript variants have been described for this gene. [provided by RefSeq, Jan 2014]
Target gene [PAFAH1B2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010231 chr11 12 1 0 13 View
1039104 chr11 697 1 0 698 View
1039105 chr11 657 1 0 658 View

Target gene [PAFAH1B2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - PAFAH1B2 peak across samples

Peak Plot

> Dataset: GSE68402 - PAFAH1B2 peak across samples

Peak Plot

> Dataset: GSE270130 - PAFAH1B2 peak across samples

Peak Plot

> Dataset: GSE131257 - PAFAH1B2 peak across samples

Peak Plot