HTLV1 Target gene Detail Information

> PAFAH1B2 Gene Search Result


Gene Information
Gene Name PAFAH1B2
Gene ID 5049
Gene Full Name platelet activating factor acetylhydrolase 1b catalytic subunit 2
Gene Alias HEL-S-303
Transcripts ENSG00000168092
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Nucleoli, Plasma membrane;
Membrane Info Cancer-related genes, Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID P68402
HGNC ID HGNC:8575
OMIM ID 602508
Summary Platelet-activating factor acetylhydrolase (PAFAH) inactivates platelet-activating factor (PAF) into acetate and LYSO-PAF. This gene encodes the beta subunit of PAFAH, the other subunits are alpha and gamma. Multiple alternatively spliced transcript variants have been described for this gene. [provided by RefSeq, Jan 2014]
Target gene [PAFAH1B2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004835 chr11 90 10 3 103 View

Target gene [PAFAH1B2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PAFAH1B2 peak across samples

Peak Plot