HTLV1 Target gene Detail Information

> PARVA Gene Search Result


Gene Information
Gene Name PARVA
Gene ID 55742
Gene Full Name parvin alpha
Gene Alias CH-ILKBP|MXRA2
Transcripts ENSG00000197702
Virus HTLV1
Gene Type protein-coding
HPA Location Info Actin filaments, Focal adhesion sites;Cytosol;
Membrane Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NVD7
HGNC ID HGNC:14652
OMIM ID 608120
Summary This gene encodes a member of the parvin family of actin-binding proteins. Parvins are associated with focal contacts and contain calponin homology domains that bind to actin filaments. The encoded protein is part of the integrin-linked kinase signaling complex and plays a role in cell adhesion, motility and survival. [provided by RefSeq, Dec 2010]
Target gene [PARVA] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009305 chr11 34 0 4 38 View

Target gene [PARVA] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PARVA peak across samples

Peak Plot