HTLV1 Target gene Detail Information

> PCCA Gene Search Result


Gene Information
Gene Name PCCA
Gene ID 5095
Gene Full Name propionyl-CoA carboxylase subunit alpha
Gene Alias -
Transcripts ENSG00000175198
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Plasma proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID P05165
HGNC ID HGNC:8653
OMIM ID 232000
Summary The protein encoded by this gene is the alpha subunit of the heterodimeric mitochondrial enzyme Propionyl-CoA carboxylase. PCCA encodes the biotin-binding region of this enzyme. Mutations in either PCCA or PCCB (encoding the beta subunit) lead to an enzyme deficiency resulting in propionic acidemia. Multiple transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, May 2010]
Target gene [PCCA] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001907 chr13 11 256 52 319 View
6002828 chr13 175 21 10 206 View
6004272 chr13 96 24 2 122 View
6012774 chr13 13 7 1 21 View
6019459 chr13 4 4 0 8 View
6020740 chr13 5 1 0 6 View
6021952 chr13 0 5 0 5 View
6026637 chr13 0 2 0 2 View
6031083 chr13 0 0 0 0 View

Target gene [PCCA] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PCCA peak across samples

Peak Plot