Gene Name	PDZRN3
Gene ID	23024
Gene Full Name	PDZ domain containing ring finger 3
Gene Alias	LNX3|SEMACAP3|SEMCAP3
Transcripts	ENSG00000121440
Virus	HTLV1
Gene Type	protein-coding
HPA Location Info	Cytosol;Nucleoplasm;
Membrane Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q9UPQ7
HGNC ID	HGNC:17704
OMIM ID	609729
Summary	This gene encodes a member of the LNX (Ligand of Numb Protein-X) family of RING-type ubiquitin E3 ligases. This protein may function in vascular morphogenesis and the differentiation of adipocytes, osteoblasts and myoblasts. This protein may be targeted for degradation by the human papilloma virus E6 protein. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6001442	chr3	423	10	2	435	View
6002019	chr3	5	279	15	299	View
6017325	chr3	10	1	0	11	View
6024879	chr3	3	0	0	3	View

Data ID	Experiment type	Sample number	Platform
C   GSE94732	Chip-seq	24	Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557	Expression array	6	Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244	Expression array	15	[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789	Expression array	6	NCI/ATC Hs-OperonV3
GSE189602	Methylation profiling (Array)	4	Infinium MethylationEPIC
GSE136189	Methylation profiling (Array)	40	Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip

• Genome binding/occupancy profiling

When the gene can detect a peak in the dataset, a peak plot will be displayed.

> Dataset: GSE94732 - PDZRN3 peak across samples

Peak Plot