HPV Target gene Detail Information

> PGAM1P5 Gene Search Result


Gene Information
Gene Name PGAM1P5
Gene ID 100132594
Gene Full Name phosphoglycerate mutase 1 pseudogene 5
Gene Alias -
Transcripts ENSG00000293270
Virus HPV
Gene Type pseudo
HGNC ID HGNC:42452
Target gene [PGAM1P5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010418 chr12 41 82 2 125 View
5010586 chr12 43 6 0 49 View

Target gene [PGAM1P5] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - PGAM1P5 peak across samples

Peak Plot

> Dataset: GSE143026 - PGAM1P5 peak across samples

Peak Plot