HTLV1 Target gene Detail Information

> PHACTR3 Gene Search Result


Gene Information
Gene Name PHACTR3
Gene ID 116154
Gene Full Name phosphatase and actin regulator 3
Gene Alias C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ
Transcripts ENSG00000087495
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q96KR7
HGNC ID HGNC:15833
OMIM ID 608725
Summary This gene encodes a member of the phosphatase and actin regulator protein family. The encoded protein is associated with the nuclear scaffold in proliferating cells, and binds to actin and the catalytic subunit of protein phosphatase-1, suggesting that it functions as a regulatory subunit of protein phosphatase-1. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]
Target gene [PHACTR3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010048 chr20 7 20 6 33 View
6020462 chr20 7 0 0 7 View
6030861 chr20 0 0 0 0 View
6033145 chr20 0 0 0 0 View

Target gene [PHACTR3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PHACTR3 peak across samples

Peak Plot