HTLV1 Target gene Detail Information

> PHF11 Gene Search Result


Gene Information
Gene Name PHF11
Gene ID 51131
Gene Full Name PHD finger protein 11
Gene Alias APY|BCAP|IGEL|IGER|IGHER|NY-REN-34|NYREN34
Transcripts ENSG00000136147
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nuclear membrane;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9UIL8
HGNC ID HGNC:17024
OMIM ID 607796
Summary This gene encodes a protein containing a PHD (plant homeodomain) type zinc finger. This gene has been identified in some studies as a candidate gene for asthma. Naturally-occurring readthrough transcription may occur from the upstream SETDB2 (SET domain bifurcated 2) gene to this locus. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2016]
Target gene [PHF11] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012005 chr13 21 1 2 24 View

Target gene [PHF11] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PHF11 peak across samples

Peak Plot