HTLV1 Target gene Detail Information

> PITPNM2 Gene Search Result


Gene Information
Gene Name PITPNM2
Gene ID 57605
Gene Full Name phosphatidylinositol transfer protein membrane associated 2
Gene Alias NIR-3|NIR3|RDGB2|RDGBA2
Transcripts ENSG00000090975
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9BZ72
HGNC ID HGNC:21044
OMIM ID 608920
Summary PITPNM2 belongs to a family of membrane-associated phosphatidylinositol transfer domain-containing proteins that share homology with the Drosophila retinal degeneration B (rdgB) protein (Ocaka et al., 2005 [PubMed 15627748]).[supplied by OMIM, Mar 2008]
Target gene [PITPNM2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006816 chr12 8 18 37 63 View
6007313 chr12 24 5 28 57 View

Target gene [PITPNM2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PITPNM2 peak across samples

Peak Plot