HTLV1 Target gene Detail Information

> PLXNC1 Gene Search Result


Gene Information
Gene Name PLXNC1
Gene ID 10154
Gene Full Name plexin C1
Gene Alias CD232|PLXN-C1|VESPR
Transcripts ENSG00000136040
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info CD markers, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O60486
HGNC ID HGNC:9106
OMIM ID 604259
Summary This gene encodes a member of the plexin family. Plexins are transmembrane receptors for semaphorins, a large family of proteins that regulate axon guidance, cell motility and migration, and the immune response. The encoded protein and its ligand regulate melanocyte adhesion, and viral semaphorins may modulate the immune response by binding to this receptor. The encoded protein may be a tumor suppressor protein for melanoma. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Jan 2011]
Target gene [PLXNC1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6014274 chr12 14 3 0 17 View
6014275 chr12 14 3 0 17 View
6028126 chr12 1 0 0 1 View

Target gene [PLXNC1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PLXNC1 peak across samples

Peak Plot