HPV Target gene Detail Information

> PRAG1 Gene Search Result


Gene Information
Gene Name PRAG1
Gene ID 157285
Gene Full Name PEAK1 related, kinase-activating pseudokinase 1
Gene Alias NACK|PEAK2|PRAGMIN|SGK223
Transcripts ENSG00000275342
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoli;Focal adhesion sites;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q86YV5
HGNC ID HGNC:25438
OMIM ID 617344
Summary This gene encodes an enzyme that belongs to the tyrosine protein kinase family. A similar protein in rat binds to Rho family GTPase 2 (Rnd2) and regulates neurite outgrowth via activation of Ras homolog gene family, member A (RhoA). [provided by RefSeq, Mar 2014]
Target gene [PRAG1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5009946 chr8 19 140 34 193 View

Target gene [PRAG1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE197461 scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - PRAG1 peak across samples

Peak Plot

> Dataset: GSE143026 - PRAG1 peak across samples

Peak Plot