HTLV1 Target gene Detail Information

> PRICKLE2 Gene Search Result


Gene Information
Gene Name PRICKLE2
Gene ID 166336
Gene Full Name prickle planar cell polarity protein 2
Gene Alias EPM5
Transcripts ENSG00000163637
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus;Vesicles;
Membrane Info Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q7Z3G6
HGNC ID HGNC:20340
OMIM ID 608501
Summary This gene encodes a homolog of Drosophila prickle. The exact function of this gene is not known, however, studies in mice suggest that it may be involved in seizure prevention. Mutations in this gene are associated with progressive myoclonic epilepsy type 5. [provided by RefSeq, Dec 2011]
Target gene [PRICKLE2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004252 chr3 115 8 0 123 View
6007097 chr3 15 28 16 59 View
6013120 chr3 6 14 0 20 View
6018343 chr3 6 3 0 9 View
6020649 chr3 4 1 1 6 View
6023396 chr3 2 2 0 4 View

Target gene [PRICKLE2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PRICKLE2 peak across samples

Peak Plot