HPV Target gene Detail Information

> PRKAG2-AS1 Gene Search Result


Gene Information
Gene Name PRKAG2-AS1
Gene ID 100505483
Gene Full Name PRKAG2 antisense RNA 1
Gene Alias -
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:40468
Target gene [PRKAG2-AS1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005769 chr7 22 90 11 123 View

Target gene [PRKAG2-AS1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - PRKAG2-AS1 peak across samples

Peak Plot

> Dataset: GSE143026 - PRKAG2-AS1 peak across samples

Peak Plot