HBV Target gene Detail Information

> PSD3 Gene Search Result

Gene Information

Gene Name	PSD3
Gene ID	23362
Gene Full Name	pleckstrin and Sec7 domain containing 3
Gene Alias	EFA6D\|EFA6R\|HCA67
Transcripts	ENSG00000156011
Virus	HBV
Gene Type	protein-coding
HPA Location Info	Nucleoplasm, Vesicles;Cytosol, Calyx, Mid piece, Principal piece, End piece;
Membrane Info	Predicted intracellular proteins
Uniport_ID	Q9NYI0
HGNC ID	HGNC:19093
OMIM ID	614440
Summary	Predicted to enable guanyl-nucleotide exchange factor activity and phospholipid binding activity. Predicted to be involved in regulation of ARF protein signal transduction. Predicted to be located in membrane. Predicted to be active in glutamatergic synapse; postsynapse; and ruffle membrane. [provided by Alliance of Genome Resources, Apr 2025]

Target gene [PSD3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1008535	chr8	14	6	0	20	View
1012390	chr8	7	0	0	7	View
1043317	chr8	0	0	0	0	View
1043318	chr8	11	2	8	21	View

Target gene [PSD3] related to Omics data

Data ID	Experiment type	Sample number	Platform
GSE236281	RNA-seq	12	Illumina MiSeq (Homo sapiens)
C GSE35465	Chip-seq;RNA-seq	6	Illumina HiSeq 2000 (Homo sapiens)
GSE199850	scRNA-seq	1	HiSeq X Ten (Homo sapiens)
C GSE68402	Chip-seq	26	Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV	DNA methylation sequencing;RNA-seq	97	TCGA
C GSE270130	Chip-seq	27	Illumina NovaSeq 6000 (Homo sapiens)
C GSE64877	Chip-seq	2	Illumina Genome Analyzer (Homo sapiens)
GSE224901	RNA-seq	21	Illumina NovaSeq 6000 (Homo sapiens)
C GSE100400	Chip-seq;RNA-seq;4C_cccDNA	31	Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897	RNA-seq	95	Illumina HiSeq 4000 (Homo sapiens)
GSE262515	RNA-seq	21	Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345	RNA-seq	4	Illumina HiSeq 2500 (Homo sapiens)
C GSE131257	ATAC-seq;RNA-seq	19	Illumina HiSeq 2500 (Homo sapiens)
GSE94660	RNA-seq	42	Illumina HiSeq 2500 (Homo sapiens)

Genome binding/occupancy profiling

When the gene can detect a peak in the dataset, a peak plot will be displayed.

> Dataset: GSE35465 - PSD3 peak across samples
Peak Plot
> Dataset: GSE68402 - PSD3 peak across samples
Peak Plot
> Dataset: GSE270130 - PSD3 peak across samples
Peak Plot
> Dataset: GSE64877 - PSD3 peak across samples
Peak Plot
> Dataset: GSE100400 - PSD3 peak across samples
Peak Plot
> Dataset: GSE131257 - PSD3 peak across samples
Peak Plot