HTLV1 Target gene Detail Information

> RAD51B Gene Search Result


Gene Information
Gene Name RAD51B
Gene ID 5890
Gene Full Name RAD51 paralog B
Gene Alias R51H2|RAD51L1|REC2
Transcripts ENSG00000182185
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear bodies;Nucleoplasm;
Membrane Info Cancer-related genes, Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O15315
HGNC ID HGNC:9822
OMIM ID 602948
Summary The protein encoded by this gene is a member of the RAD51 protein family. RAD51 family members are evolutionarily conserved proteins essential for DNA repair by homologous recombination. This protein has been shown to form a stable heterodimer with the family member RAD51C, which further interacts with the other family members, such as RAD51, XRCC2, and XRCC3. Overexpression of this gene was found to cause cell cycle G1 delay and cell apoptosis, which suggested a role of this protein in sensing DNA damage. Rearrangements between this locus and high mobility group AT-hook 2 (HMGA2, GeneID 8091) have been observed in uterine leiomyomata. [provided by RefSeq, Mar 2016]
Target gene [RAD51B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003268 chr14 155 11 5 171 View
6005119 chr14 43 52 0 95 View
6005257 chr14 74 15 3 92 View
6014293 chr14 16 0 1 17 View
6014761 chr14 0 9 7 16 View

Target gene [RAD51B] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RAD51B peak across samples

Peak Plot