Gene Information
|
Gene Name
|
RAG1 |
|
Gene ID
|
5896
|
|
Gene Full Name
|
recombination activating 1 |
|
Gene Alias
|
RAG-1|RNF74 |
|
Transcripts
|
ENSG00000166349
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Nucleoplasm;Nucleoli; 
|
|
Membrane Info
|
Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Plasma proteins, Potential drug targets, Predicted intracellular proteins |
|
Uniport_ID
|
P15918
|
|
HGNC ID
|
HGNC:9831
|
|
OMIM ID
|
179615 |
|
Summary
|
The protein encoded by this gene is involved in activation of immunoglobulin V-D-J recombination. The encoded protein is involved in recognition of the DNA substrate, but stable binding and cleavage activity also requires RAG2. Defects in this gene can be the cause of several diseases. [provided by RefSeq, Jul 2008] |
Target gene [RAG1] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6003834 |
chr11 |
122 |
16 |
1 |
139 |
View |
| 6018502 |
chr11 |
9 |
0 |
0 |
9 |
View |
| 6018503 |
chr11 |
9 |
0 |
0 |
9 |
View |
| 6018504 |
chr11 |
9 |
0 |
0 |
9 |
View |
| 6020990 |
chr11 |
3 |
3 |
0 |
6 |
View |
Target gene [RAG1] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE94732
|
Chip-seq |
24 |
Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens) |
|
GSE168557
|
Expression array |
6 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) |
|
GSE52244
|
Expression array |
15 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
GSE10789
|
Expression array |
6 |
NCI/ATC Hs-OperonV3 |
|
GSE189602
|
Methylation profiling (Array) |
4 |
Infinium MethylationEPIC |
|
GSE136189
|
Methylation profiling (Array) |
40 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE94732 - RAG1 peak across samples
|
Peak Plot
|
|
|
HTLV1 Target gene Detail Information
