HPV Target gene Detail Information

> RALY-AS1 Gene Search Result


Gene Information
Gene Name RALY-AS1
Gene ID 101926888
Gene Full Name RALY antisense RNA 1
Gene Alias -
Transcripts ENSG00000285230
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:50743
lncRNASNP2 ID RALY-AS1
Target gene [RALY-AS1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004727 chr20 28 5 1 34 View
5004741 chr20 4 0 0 4 View
5004745 chr20 76 10 4 90 View
5004750 chr20 41 1 0 42 View
5004752 chr20 14 2 0 16 View
5004758 chr20 13 3 0 16 View
5004771 chr20 28 5 1 34 View
5004846 chr20 28 5 1 34 View
5004847 chr20 28 5 1 34 View
5004979 chr20 110 107 30 247 View
5005500 chr20 28 5 1 34 View
5005503 chr20 28 5 1 34 View
5005504 chr20 28 5 1 34 View
5006427 chr20 26 2 11 39 View
5006428 chr20 4 1 0 5 View
5006432 chr20 38 0 0 38 View

Target gene [RALY-AS1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - RALY-AS1 peak across samples

Peak Plot

> Dataset: GSE143026 - RALY-AS1 peak across samples

Peak Plot