HTLV1 Target gene Detail Information

> RAPGEF3 Gene Search Result


Gene Information
Gene Name RAPGEF3
Gene ID 10411
Gene Full Name Rap guanine nucleotide exchange factor 3
Gene Alias CAMP-GEFI|EPAC|EPAC1|HSU79275|bcm910
Transcripts ENSG00000079337
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Endoplasmic reticulum;
Membrane Info Predicted intracellular proteins
Uniport_ID O95398
HGNC ID HGNC:16629
OMIM ID 606057
Summary Enables guanyl-nucleotide exchange factor activity and protein domain specific binding activity. Involved in several processes, including Rap protein signal transduction; cellular response to cAMP; and regulation of syncytium formation by plasma membrane fusion. Located in several cellular components, including filopodium; lamellipodium; and microvillus. Implicated in nicotine dependence. Biomarker of congestive heart failure. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [RAPGEF3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002935 chr12 72 28 96 196 View
6012197 chr12 19 4 0 23 View

Target gene [RAPGEF3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RAPGEF3 peak across samples

Peak Plot