HTLV1 Target gene Detail Information

> RCAN2 Gene Search Result


Gene Information
Gene Name RCAN2
Gene ID 10231
Gene Full Name regulator of calcineurin 2
Gene Alias CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4
Transcripts ENSG00000172348
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;Nucleoplasm, Vesicles, Microtubules, Primary cilium;
Membrane Info Predicted intracellular proteins
Uniport_ID Q14206
HGNC ID HGNC:3041
OMIM ID 604876
Summary This gene encodes a member of the regulator of calcineurin (RCAN) protein family. These proteins play a role in many physiological processes by binding to the catalytic domain of calcineurin A, inhibiting calcineurin-mediated nuclear translocation of the transcription factor NFATC1. Expression of this gene in skin fibroblasts is upregulated by thyroid hormone, and the encoded protein may also play a role in endothelial cell function and angiogenesis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Oct 2011]
Target gene [RCAN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002773 chr6 186 13 11 210 View
6025730 chr6 0 0 3 3 View

Target gene [RCAN2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RCAN2 peak across samples

Peak Plot