HTLV1 Target gene Detail Information

> RELN Gene Search Result


Gene Information
Gene Name RELN
Gene ID 5649
Gene Full Name reelin
Gene Alias ETL7|LIS2|PRO1598|RL
Transcripts ENSG00000189056
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus;Vesicles;Secreted in brain;
Membrane Info Disease related genes, Human disease related genes, Plasma proteins, Predicted secreted proteins
Uniport_ID P78509
HGNC ID HGNC:9957
OMIM ID 600514
Summary This gene encodes a large secreted extracellular matrix protein thought to control cell-cell interactions critical for cell positioning and neuronal migration during brain development. This protein may be involved in schizophrenia, autism, bipolar disorder, major depression and in migration defects associated with temporal lobe epilepsy. Mutations of this gene are associated with autosomal recessive lissencephaly with cerebellar hypoplasia. Two transcript variants encoding distinct isoforms have been identified for this gene. Other transcript variants have been described but their full length nature has not been determined. [provided by RefSeq, Jul 2008]
Target gene [RELN] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009677 chr7 6 19 10 35 View
6010994 chr7 7 19 2 28 View
6024907 chr7 0 2 1 3 View

Target gene [RELN] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RELN peak across samples

Peak Plot