HBV Target gene Detail Information

> RNF10 Gene Search Result


Gene Information
Gene Name RNF10
Gene ID 9921
Gene Full Name ring finger protein 10
Gene Alias RIE2
Transcripts ENSG00000022840
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Mitochondria;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8N5U6
HGNC ID HGNC:10055
OMIM ID 615998
Summary The protein encoded by this gene contains a ring finger motif, which is known to be involved in protein-protein interactions. The specific function of this protein has not yet been determined. EST data suggests the existence of multiple alternatively spliced transcript variants, however, their full length nature is not known. [provided by RefSeq, Jul 2008]
Target gene [RNF10] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008268 chr12 6 12 3 21 View
1009484 chr12 6 7 2 15 View
1023322 chr12 6 12 3 21 View
1023323 chr12 6 7 2 15 View

Target gene [RNF10] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - RNF10 peak across samples

Peak Plot

> Dataset: GSE68402 - RNF10 peak across samples

Peak Plot

> Dataset: GSE270130 - RNF10 peak across samples

Peak Plot

> Dataset: GSE131257 - RNF10 peak across samples

Peak Plot