HTLV1 Target gene Detail Information

> RNF138 Gene Search Result


Gene Information
Gene Name RNF138
Gene ID 51444
Gene Full Name ring finger protein 138
Gene Alias HSD-4|NARF|STRIN|hNARF
Transcripts ENSG00000134758
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q8WVD3
HGNC ID HGNC:17765
OMIM ID 616319
Summary The protein encoded by this gene contains a RING finger, a motif present in a variety of functionally distinct proteins and known to be involved in protein-DNA and protein-protein interactions. Alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq, Jul 2008]
Target gene [RNF138] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012834 chr18 11 10 0 21 View

Target gene [RNF138] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RNF138 peak across samples

Peak Plot