HPV Target gene Detail Information

> RPS10-NUDT3 Gene Search Result


Gene Information
Gene Name RPS10-NUDT3
Gene ID 100529239
Gene Full Name RPS10-NUDT3 readthrough
Gene Alias -
Transcripts ENSG00000270800
Virus HPV
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:49181
Summary This locus represents naturally occurring read-through transcription between the neighboring RPS10 (ribosomal protein S10) and NUDT3 (nudix (nucleoside diphosphate linked moiety X)-type motif 3) genes on chromosome 6. The read-through transcript produces a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Feb 2011]
Target gene [RPS10-NUDT3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5011169 chr6 42 1 0 43 View
5016119 chr6 30 2 0 32 View

Target gene [RPS10-NUDT3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - RPS10-NUDT3 peak across samples

Peak Plot

> Dataset: GSE143026 - RPS10-NUDT3 peak across samples

Peak Plot