HTLV1 Target gene Detail Information

> RREB1 Gene Search Result


Gene Information
Gene Name RREB1
Gene ID 6239
Gene Full Name ras responsive element binding protein 1
Gene Alias FINB|HNT|LZ321|RREB-1|Zep-1
Transcripts ENSG00000124782
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear speckles;Nucleoli fibrillar center;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q92766
HGNC ID HGNC:10449
OMIM ID 602209
Summary The protein encoded by this gene is a zinc finger transcription factor that binds to RAS-responsive elements (RREs) of gene promoters. It has been shown that the calcitonin gene promoter contains an RRE and that the encoded protein binds there and increases expression of calcitonin, which may be involved in Ras/Raf-mediated cell differentiation. Multiple transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Dec 2009]
Target gene [RREB1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001428 chr6 194 70 179 443 View
6007370 chr6 2 35 19 56 View
6013479 chr6 16 0 3 19 View
6014018 chr6 14 3 0 17 View

Target gene [RREB1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RREB1 peak across samples

Peak Plot