HTLV1 Target gene Detail Information

> RTCB Gene Search Result


Gene Information
Gene Name RTCB
Gene ID 51493
Gene Full Name RNA 2',3'-cyclic phosphate and 5'-OH ligase
Gene Alias C22orf28|DJ149A16.6|FAAP|HSPC117
Transcripts ENSG00000100220
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Vesicles, Cytosol;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9Y3I0
HGNC ID HGNC:26935
OMIM ID 613901
Summary Enables RNA ligase (GTP) activity and vinculin binding activity. Involved in tRNA splicing, via endonucleolytic cleavage and ligation. Located in cytosol and nucleoplasm. Part of tRNA-splicing ligase complex. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [RTCB] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6016137 chr22 13 0 0 13 View

Target gene [RTCB] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RTCB peak across samples

Peak Plot