HTLV1 Target gene Detail Information

> RYR3 Gene Search Result


Gene Information
Gene Name RYR3
Gene ID 6263
Gene Full Name ryanodine receptor 3
Gene Alias CMYO20|CMYP20|RYR-3
Transcripts ENSG00000198838
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q15413
HGNC ID HGNC:10485
OMIM ID 180903
Summary The protein encoded by this gene is a ryanodine receptor, which functions to release calcium from intracellular storage for use in many cellular processes. For example, the encoded protein is involved in skeletal muscle contraction by releasing calcium from the sarcoplasmic reticulum followed by depolarization of T-tubules. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2011]
Target gene [RYR3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010775 chr15 28 1 0 29 View
6011191 chr15 22 4 1 27 View
6014405 chr15 16 0 0 16 View
6014979 chr15 10 5 0 15 View
6019793 chr15 7 0 0 7 View
6027490 chr15 0 2 0 2 View
6028261 chr15 0 1 0 1 View
6033356 chr15 0 0 0 0 View

Target gene [RYR3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RYR3 peak across samples

Peak Plot