HBV Target gene Detail Information

> SCFD2 Gene Search Result


Gene Information
Gene Name SCFD2
Gene ID 152579
Gene Full Name sec1 family domain containing 2
Gene Alias STXBP1L1
Transcripts ENSG00000184178
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q8WU76
HGNC ID HGNC:30676
Summary Predicted to be involved in intracellular protein transport and vesicle-mediated transport. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SCFD2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003563 chr4 25 23 76 124 View
1004324 chr4 21 23 41 85 View
1011636 chr4 7 1 0 8 View
1014481 chr4 3 0 0 3 View
1017841 chr4 0 0 0 0 View
1021267 chr4 7 1 0 8 View
1021268 chr4 3 0 0 3 View
1022005 chr4 0 0 0 0 View
1041387 chr4 1 1 0 2 View
1042844 chr4 2 0 0 2 View
1042845 chr4 7 2 1 10 View
1042846 chr4 4 0 0 4 View

Target gene [SCFD2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
S
  GSE247322 		scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE247322 - Gene expression in cell subsets