HTLV1 Target gene Detail Information

> SCFD2 Gene Search Result


Gene Information
Gene Name SCFD2
Gene ID 152579
Gene Full Name sec1 family domain containing 2
Gene Alias STXBP1L1
Transcripts ENSG00000184178
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q8WU76
HGNC ID HGNC:30676
Summary Predicted to be involved in intracellular protein transport and vesicle-mediated transport. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SCFD2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001266 chr4 161 219 129 509 View
6002655 chr4 15 201 4 220 View
6004698 chr4 80 22 5 107 View
6005188 chr4 91 1 1 93 View
6006423 chr4 68 1 0 69 View
6008382 chr4 46 0 0 46 View
6010335 chr4 32 0 0 32 View
6020979 chr4 6 0 0 6 View
6021799 chr4 5 0 0 5 View
6021943 chr4 3 2 0 5 View
6023525 chr4 3 1 0 4 View
6027816 chr4 1 0 0 1 View
6031164 chr4 0 0 0 0 View

Target gene [SCFD2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SCFD2 peak across samples

Peak Plot