Gene Information
|
Gene Name
|
SCHLAP1 |
|
Gene ID
|
101669767
|
|
Gene Full Name
|
SWI/SNF complex antagonist associated with prostate cancer 1 |
|
Gene Alias
|
LINC00913|PCAT11|PCAT114 |
|
Transcripts
|
ENSG00000281131
|
|
Virus
|
HPV |
|
Gene Type
|
ncRNA |
|
HGNC ID
|
HGNC:48603
|
|
OMIM ID
|
615568 |
|
lncRNASNP2 ID
|
SCHLAP1
|
Target gene [SCHLAP1] related to VISs
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 5010020 |
chr2 |
0 |
5 |
0 |
5 |
View |
| 5011964 |
chr2 |
7 |
1 |
0 |
8 |
View |
Target gene [SCHLAP1] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE183048
|
Chip-seq |
24 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE169622
|
Methylation profiling (Array) |
9 |
Infinium MethylationEPIC |
|
GSE196215
|
RNA-seq |
8 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
E TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE165883
|
RNA-seq |
20 |
Illumina NextSeq 500 (Homo sapiens) |
When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.
> Dataset: TCGA_CESC - SCHLAP1 expression across samples
|
Volcano Plot
|
Bar Plot
|
HPV Target gene Detail Information
