Gene Information
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Gene Name
|
SEM1 |
|
Gene ID
|
7979
|
|
Gene Full Name
|
SEM1 26S proteasome subunit |
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Gene Alias
|
C7orf76|DSS1|ECD|PSMD15|SHFD1|SHFM1|SHSF1|Shfdg1 |
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Transcripts
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ENSG00000127922
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Virus
|
HPV |
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Gene Type
|
protein-coding |
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HPA Location Info
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Cytosol; 
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Membrane Info
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Predicted intracellular proteins |
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Uniport_ID
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P60896, Q6ZVN7
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HGNC ID
|
HGNC:10845
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OMIM ID
|
601285 |
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Summary
|
The product of this gene has been localized within the split hand/split foot malformation locus SHFM1 at chromosome 7. It has been proposed to be a candidate gene for the autosomal dominant form of the heterogeneous limb developmental disorder split hand/split foot malformation type 1. In addition, it has been shown to directly interact with BRCA2. It also may play a role in the completion of the cell cycle. [provided by RefSeq, Jul 2008] |
Target gene [SEM1] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
Target gene [SEM1] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE183048
|
Chip-seq |
24 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE181805
|
Expression array |
25 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
|
GSE164690
|
scRNA-seq |
51 |
Illumina NextSeq 500 (Homo sapiens) |
|
S GSE197461
|
scRNA-seq |
16 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
GSE140662
|
Expression array |
8 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
|
TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.
> Dataset: GSE197461 - Gene expression in cell subsets
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HPV Target gene Detail Information
