HTLV1 Target gene Detail Information

> SEMA6C Gene Search Result


Gene Information
Gene Name SEMA6C
Gene ID 10500
Gene Full Name semaphorin 6C
Gene Alias SEMAY|Sema-Y|m-SemaY|m-SemaY2
Transcripts ENSG00000143434
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted membrane proteins
Uniport_ID Q9H3T2
HGNC ID HGNC:10740
OMIM ID 609294
Summary This gene encodes a member of the semaphorin family. Semaphorins represent important molecular signals controlling multiple aspects of the cellular response that follows CNS injury, and thus may play an important role in neural regeneration. [provided by RefSeq, May 2010]
Target gene [SEMA6C] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000874 chr1 619 39 103 761 View

Target gene [SEMA6C] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SEMA6C peak across samples

Peak Plot