HBV Target gene Detail Information

> SENP5 Gene Search Result


Gene Information
Gene Name SENP5
Gene ID 205564
Gene Full Name SUMO specific peptidase 5
Gene Alias -
Transcripts ENSG00000119231
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q96HI0
HGNC ID HGNC:28407
OMIM ID 612845
Summary The reversible posttranslational modification of proteins by the addition of small ubiquitin-like SUMO proteins (see SUMO1; MIM 601912) is required for numerous biologic processes. SUMO-specific proteases, such as SENP5, are responsible for the initial processing of SUMO precursors to generate a C-terminal diglycine motif required for the conjugation reaction. They also have isopeptidase activity for the removal of SUMO from high molecular mass SUMO conjugates (Di Bacco et al., 2006 [PubMed 16738315]).[supplied by OMIM, Jun 2009]
Target gene [SENP5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001839 chr3 301 155 3 459 View
1001918 chr3 263 153 3 419 View
1001991 chr3 235 145 3 383 View
1002028 chr3 223 144 2 369 View
1002046 chr3 219 143 0 362 View
1002099 chr3 278 64 3 345 View
1002110 chr3 278 60 3 341 View
1002115 chr3 203 135 0 338 View
1002177 chr3 270 48 3 321 View
1002656 chr3 153 74 0 227 View
1008775 chr3 12 7 0 19 View
1020254 chr3 217 143 0 360 View
1020266 chr3 221 143 1 365 View
1020270 chr3 141 46 0 187 View
1021202 chr3 219 143 0 362 View
1021519 chr3 153 74 0 227 View
1021822 chr3 278 64 3 345 View
1023858 chr3 203 135 0 338 View

Target gene [SENP5] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465
Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402
Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130
Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400
Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257
ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SENP5 peak across samples

Peak Plot


> Dataset: GSE68402 - SENP5 peak across samples

Peak Plot


> Dataset: GSE270130 - SENP5 peak across samples

Peak Plot


> Dataset: GSE100400 - SENP5 peak across samples

Peak Plot


> Dataset: GSE131257 - SENP5 peak across samples

Peak Plot