HTLV1 Target gene Detail Information

> SGTB Gene Search Result


Gene Information
Gene Name SGTB
Gene ID 54557
Gene Full Name small glutamine rich tetratricopeptide repeat co-chaperone beta
Gene Alias SGT2
Transcripts ENSG00000197860
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Primary cilium;Nuclear speckles, Microtubules, Basal body;
Membrane Info Predicted intracellular proteins
Uniport_ID Q96EQ0
HGNC ID HGNC:23567
OMIM ID 620526
Summary Predicted to enable molecular adaptor activity. Predicted to be involved in post-translational protein targeting to endoplasmic reticulum membrane. Predicted to be part of TRC complex. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SGTB] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6022198 chr5 5 0 0 5 View

Target gene [SGTB] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SGTB peak across samples

Peak Plot