HBV Target gene Detail Information

> SH3BP4 Gene Search Result


Gene Information
Gene Name SH3BP4
Gene ID 23677
Gene Full Name SH3 domain binding protein 4
Gene Alias BOG25|TTP
Transcripts ENSG00000130147
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins
Uniport_ID Q9P0V3
HGNC ID HGNC:10826
OMIM ID 605611
Summary This gene encodes a protein with 3 Asn-Pro-Phe (NPF) motifs, an SH3 domain, a PXXP motif, a bipartite nuclear targeting signal, and a tyrosine phosphorylation site. This protein is involved in cargo-specific control of clathrin-mediated endocytosis, specifically controlling the internalization of a specific protein receptor. [provided by RefSeq, Jul 2008]
Target gene [SH3BP4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003135 chr2 106 26 30 162 View
1004659 chr2 69 4 0 73 View
1020483 chr2 0 0 10 10 View
1039874 chr2 8 0 0 8 View
1039875 chr2 8 0 0 8 View
1039876 chr2 8 0 0 8 View
1039877 chr2 8 0 0 8 View
1039878 chr2 8 0 0 8 View
1039879 chr2 8 0 0 8 View
1039880 chr2 8 0 0 8 View
1039881 chr2 8 0 0 8 View
1039882 chr2 8 0 0 8 View
1039883 chr2 8 0 0 8 View
1039884 chr2 8 0 0 8 View
1039885 chr2 8 0 0 8 View
1039886 chr2 8 0 0 8 View
1039887 chr2 8 0 0 8 View
1039888 chr2 8 0 0 8 View
1039889 chr2 8 0 0 8 View
1039890 chr2 8 0 0 8 View

Target gene [SH3BP4] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SH3BP4 peak across samples

Peak Plot

> Dataset: GSE68402 - SH3BP4 peak across samples

Peak Plot

> Dataset: GSE270130 - SH3BP4 peak across samples

Peak Plot

> Dataset: GSE131257 - SH3BP4 peak across samples

Peak Plot