HTLV1 Target gene Detail Information

> SH3TC1 Gene Search Result


Gene Information
Gene Name SH3TC1
Gene ID 54436
Gene Full Name SH3 domain and tetratricopeptide repeats 1
Gene Alias -
Transcripts ENSG00000125089
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoli, Nucleoli rim;Nucleoplasm, Cytosol;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q8TE82
HGNC ID HGNC:26009
Target gene [SH3TC1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006966 chr4 19 24 18 61 View
6011089 chr4 9 19 0 28 View
6013532 chr4 7 9 3 19 View

Target gene [SH3TC1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SH3TC1 peak across samples

Peak Plot