HTLV1 Target gene Detail Information

> SHCBP1 Gene Search Result


Gene Information
Gene Name SHCBP1
Gene ID 79801
Gene Full Name SHC binding and spindle associated 1
Gene Alias PAL
Transcripts ENSG00000171241
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear bodies;Microtubules, Midbody, Mitotic spindle;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8NEM2
HGNC ID HGNC:29547
OMIM ID 611027
Summary Predicted to enable SH2 domain binding activity. Predicted to be involved in fibroblast growth factor receptor signaling pathway and regulation of neural precursor cell proliferation. Predicted to be located in cytoplasm; midbody; and spindle. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SHCBP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004823 chr16 92 11 0 103 View
6005262 chr16 67 4 21 92 View
6006636 chr16 48 15 2 65 View
6011032 chr16 25 3 0 28 View
6013350 chr16 19 0 0 19 View

Target gene [SHCBP1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SHCBP1 peak across samples

Peak Plot