HTLV1 Target gene Detail Information

> SHISA6 Gene Search Result


Gene Information
Gene Name SHISA6
Gene ID 388336
Gene Full Name shisa family member 6
Gene Alias -
Transcripts ENSG00000188803
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Plasma membrane;
Membrane Info Predicted membrane proteins, Transporters
Uniport_ID Q6ZSJ9
HGNC ID HGNC:34491
OMIM ID 617327
Summary Predicted to enable ionotropic glutamate receptor binding activity. Predicted to be involved in several processes, including excitatory chemical synaptic transmission; modulation of chemical synaptic transmission; and negative regulation of canonical Wnt signaling pathway. Predicted to be located in asymmetric, glutamatergic, excitatory synapse. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in dendritic spine membrane; glutamatergic synapse; and postsynaptic density membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SHISA6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009693 chr17 2 29 4 35 View
6017055 chr17 9 2 0 11 View
6018669 chr17 7 2 0 9 View
6019476 chr17 8 0 0 8 View
6020372 chr17 7 0 0 7 View
6026252 chr17 2 0 0 2 View
6029051 chr17 0 0 1 1 View
6033189 chr17 0 0 0 0 View

Target gene [SHISA6] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SHISA6 peak across samples

Peak Plot