HTLV1 Target gene Detail Information

> SLC24A2 Gene Search Result


Gene Information
Gene Name SLC24A2
Gene ID 25769
Gene Full Name solute carrier family 24 member 2
Gene Alias NCKX2
Transcripts ENSG00000155886
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;
Membrane Info Metabolic proteins, Predicted membrane proteins, Transporters
Uniport_ID Q9UI40
HGNC ID HGNC:10976
OMIM ID 609838
Summary This gene encodes a member of the calcium/cation antiporter superfamily of transport proteins. The encoded protein belongs to the SLC24 branch of exchangers, which can mediate the extrusion of one Ca2+ ion and one K+ ion in exchange for four Na+ ions. This family member is a retinal cone/brain exchanger that can mediate a light-induced decrease in free Ca2+ concentration. This protein may also play a neuroprotective role during ischemic brain injury. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2011]
Target gene [SLC24A2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002235 chr9 245 21 0 266 View
6002264 chr9 242 20 0 262 View
6010528 chr9 9 12 9 30 View
6012999 chr9 16 4 0 20 View
6014064 chr9 1 16 0 17 View
6016763 chr9 11 0 1 12 View
6017178 chr9 5 4 2 11 View
6018749 chr9 3 6 0 9 View
6023137 chr9 2 2 0 4 View
6026032 chr9 0 2 0 2 View
6033097 chr9 0 0 0 0 View
6033514 chr9 0 0 0 0 View

Target gene [SLC24A2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SLC24A2 peak across samples

Peak Plot