HTLV1 Target gene Detail Information

> SLC27A3 Gene Search Result


Gene Information
Gene Name SLC27A3
Gene ID 11000
Gene Full Name solute carrier family 27 member 3
Gene Alias ACSVL3|FATP3|VLCS-3
Transcripts ENSG00000143554
Virus HTLV1
Gene Type protein-coding
HPA Location Info Endoplasmic reticulum, Mitochondria;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q5K4L6
HGNC ID HGNC:10997
OMIM ID 604193
Summary This gene belongs to a family of integral membrane proteins and encodes a protein that is involved in lipid metabolism. The increased expression of this gene in human neural stem cells derived from induced pluripotent stem cells suggests that it plays an important role in early brain development. Naturally occurring mutations in this gene are associated with autism spectrum disorders. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2017]
Target gene [SLC27A3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012875 chr1 10 11 0 21 View

Target gene [SLC27A3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SLC27A3 peak across samples

Peak Plot