HTLV1 Target gene Detail Information

> SLC30A8 Gene Search Result


Gene Information
Gene Name SLC30A8
Gene ID 169026
Gene Full Name solute carrier family 30 member 8
Gene Alias ZNT8|ZnT-8
Transcripts ENSG00000164756
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles, Plasma membrane;
Membrane Info Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q8IWU4
HGNC ID HGNC:20303
OMIM ID 611145
Summary The protein encoded by this gene is a zinc efflux transporter involved in the accumulation of zinc in intracellular vesicles. This gene is expressed at a high level only in the pancreas, particularly in islets of Langerhans. The encoded protein colocalizes with insulin in the secretory pathway granules of the insulin-secreting INS-1 cells. Allelic variants of this gene exist that confer susceptibility to diabetes mellitus, noninsulin-dependent (NIDDM). Several transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Mar 2010]
Target gene [SLC30A8] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6013345 chr8 10 4 5 19 View
6019953 chr8 0 7 0 7 View

Target gene [SLC30A8] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
M
  GSE136189
Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE94732 - SLC30A8 peak across samples

Peak Plot