HTLV1 Target gene Detail Information

> SLC47A1 Gene Search Result


Gene Information
Gene Name SLC47A1
Gene ID 55244
Gene Full Name solute carrier family 47 member 1
Gene Alias MATE1
Transcripts ENSG00000142494
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Metabolic proteins, Predicted membrane proteins, Transporters
Uniport_ID Q96FL8
HGNC ID HGNC:25588
OMIM ID 609832
Summary This gene is located within the Smith-Magenis syndrome region on chromosome 17. It encodes a protein of unknown function. [provided by RefSeq, Jul 2008]
Target gene [SLC47A1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009216 chr17 38 0 0 38 View

Target gene [SLC47A1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SLC47A1 peak across samples

Peak Plot