HTLV1 Target gene Detail Information

> SLCO1C1 Gene Search Result


Gene Information
Gene Name SLCO1C1
Gene ID 53919
Gene Full Name solute carrier organic anion transporter family member 1C1
Gene Alias OATP-F|OATP-RP5|OATP1|OATP14|OATP1C1|OATPF|OATPRP5|SLC21A14
Transcripts ENSG00000139155
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Metabolic proteins, Predicted membrane proteins, Transporters
Uniport_ID Q9NYB5
HGNC ID HGNC:13819
OMIM ID 613389
Summary This gene encodes a member of the organic anion transporter family. The encoded protein is a transmembrane receptor that mediates the sodium-independent uptake of thyroid hormones in brain tissues. This protein has particularly high affinity for the thyroid hormones thyroxine, tri-iodothyronine and reverse tri-iodothyronine. Polymorphisms in the gene encoding this protein may be associated with fatigue and depression in patients suffering from hyperthyroidism. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2009]
Target gene [SLCO1C1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6030387 chr12 0 0 0 0 View

Target gene [SLCO1C1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SLCO1C1 peak across samples

Peak Plot