HTLV1 Target gene Detail Information

> SLF1 Gene Search Result


Gene Information
Gene Name SLF1
Gene ID 84250
Gene Full Name SMC5-SMC6 complex localization factor 1
Gene Alias ANKRD32|BRCTD1|BRCTx
Transcripts ENSG00000133302
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9BQI6
HGNC ID HGNC:25408
OMIM ID 618467
Summary Enables ubiquitin protein ligase binding activity. Involved in several processes, including positive regulation of cellular component organization; positive regulation of double-strand break repair; and protein localization to site of double-strand break. Located in nucleoplasm and site of double-strand break. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SLF1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012767 chr5 9 9 3 21 View
6031060 chr5 0 0 0 0 View

Target gene [SLF1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SLF1 peak across samples

Peak Plot