HTLV1 Target gene Detail Information

> SNX29 Gene Search Result


Gene Information
Gene Name SNX29
Gene ID 92017
Gene Full Name sorting nexin 29
Gene Alias A-388D4.1|RUNDC2A
Transcripts ENSG00000048471
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus;Nucleoli, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8TEQ0
HGNC ID HGNC:30542
Summary Predicted to enable phosphatidylinositol binding activity. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SNX29] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005659 chr16 73 10 0 83 View
6006899 chr16 7 39 16 62 View
6007036 chr16 7 42 11 60 View
6009762 chr16 11 14 10 35 View
6013427 chr16 10 0 9 19 View

Target gene [SNX29] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SNX29 peak across samples

Peak Plot