HPV Target gene Detail Information

> SPANXA2-OT1 Gene Search Result


Gene Information
Gene Name SPANXA2-OT1
Gene ID 619455
Gene Full Name SPANXA2 overlapping transcript 1
Gene Alias CXorf18
Transcripts ENSG00000277215
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:31683
lncRNASNP2 ID SPANXA2-OT1
Target gene [SPANXA2-OT1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5016608 chrX 0 0 0 0 View

Target gene [SPANXA2-OT1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - SPANXA2-OT1 peak across samples

Peak Plot

> Dataset: GSE143026 - SPANXA2-OT1 peak across samples

Peak Plot